Datasets are deposited at the SciLifeLab Data repository. You can check them using this link https://scilifelab.figshare.com/Pelechano_Lab.
Old published data available using this link: http://data.pelechanolab.com
Additional dataset for publications.
2020
Functional connection between translation elongation and protein folding at the ribosome exit tunnel in Saccharomyces cerevisiae Olga Rodríguez-Galán, Juan J García-Gómez, Iván V Rosado, Wu Wei, Alfonso Méndez-Godoy, Benjamin Pillet, Alisa Alekseenko, Lars M Steinmetz, Vicent Pelechano, Dieter Kressler, Jesús de la Cruz, Nucleic Acids Research, , gkaa1200, https://doi.org/10.1093/nar/gkaa1200
- Interactive Fivepseq examples https://doi.org/10.17044/scilifelab.13229168.v1
Improved computational analysis of ribosome dynamics from 5′P degradome data using fivepseq. Lilit Nersisyan, Maria Ropat & Vicent Pelechano. NAR Genomics and Bioinformatics, Volume 2, Issue 4, December 2020, lqaa099, https://doi.org/10.1093/nargab/lqaa099
- Interactive Fivepseq examples https://doi.org/10.17044/scilifelab.12662153.v2
TIF-Seq2 disentangles overlapping isoforms in complex human transcriptomes. Wang J, Li B, Marques S, Steinmetz LM, Wei W, Pelechano V. Nucleic Acids Res. 2020;gkaa691. doi:10.1093/nar/gkaa691
- Browsable TIF-Seq2 tracks https://doi.org/10.17044/scilifelab.13293344.v1
2017
eIF5A facilitates translation termination globally and promotes the elongation of many non polyproline-specific tripeptide sequences. Pelechano V# and Alepuz P#. Nucleic Acids Res. 2017 May 26. doi: 10.1093/nar/gkx479.
- Raw equencing data deposited at GEO GSE91064
- Additional datasets accesible http://data.pelechanolab.com/Publications/2017_eIF5A/